Alisa Bokulich

In 1962, the publication of Thomas Kuhn’s Structure ‘revolutionized’ the way one conducts philosophical and historical studies of science. Through the introduction of both memorable and controversial notions, such as paradigms, scientific revolutions, and incommensurability, Kuhn argued against the traditionally accepted notion of scientific change as a progression towards the truth about nature, and instead substituted the idea that science is a puzzle solving activity, operating under paradigms, which become discarded after it fails to respond accordingly to anomalous challenges and a rival paradigm. Kuhn’s Structure has sold over 1.4 million copies and the Times Literary Supplement named it one of the “Hundred Most Influential Books since the Second World War.” Now, fifty years after this groundbreaking work was published, this volume offers a timely reappraisal of the legacy of Kuhn’s book and an investigation into what Structure offers philosophical, historical, and sociological studies of science in the future.

This volume presents an historical and philosophical revisiting of the foundational character of Turing's conceptual contributions and assesses the impact of the work of Alan Turing on the history and philosophy of science. Written by experts from a variety of disciplines, the book draws out the continuing significance of Turing's work. The centennial of Turing's birth in 2012 led to the highly celebrated "Alan Turing Year", which stimulated a world-wide cooperative, interdisciplinary revisiting of his life and work. Turing is widely regarded as one of the most important scientists of the twentieth century: He is the father of artificial intelligence, resolver of Hilbert's famous Entscheidungsproblem, and a code breaker who helped solve the Enigma code. His work revolutionized the very architecture of science by way of the results he obtained in logic, probability and recursion theory, morphogenesis, the foundations of cognitive psychology, mathematics, and cryptography. Many of Turing's breakthroughs were stimulated by his deep reflections on fundamental philosophical issues. Hence it is fitting that there be a volume dedicated to the philosophical impact of his work. One important strand of Turing's work is his analysis of the concept of computability, which has unquestionably come to play a central conceptual role in nearly every branch of knowledge and engineering.

We reconstruct Kuhn’s philosophy of measurement and data paying special attention to what he calls the “fifth law of thermodynamics”. According to this "law," there will always be discrepancies between experimental results and scientists’ prior expectations. The history of experiments to determine the values of the fundamental constants offers a striking illustration of Kuhn’s fifth law of thermodynamics, with no experiment giving quite the expected result. We highlight the synergy between Kuhn’s view and the systematic project of iteratively determining the value of physical constants, initiated by spectroscopist Raymond Birge, that was ongoing when Kuhn joined Berkeley in 1956. Our analysis sheds light on various underappreciated aspects of Kuhn’s thought, especially his notion of progress as improvement in measurement accuracy.

In both scientific and popular circles it is often said that we are in the midst of a sixth mass extinction. Although the urgency of our present environmental crises is not in doubt, such claims of a present mass extinction are highly controversial scientifically. Our aims are, first, to get to the bottom of this scientific debate by shedding philosophical light on the many conceptual and methodological challenges involved in answering this scientific question, and, second, to offer new philosophical perspectives on what the value of asking this question has been — and whether that value persists today. We show that the conceptual challenges in defining ‘mass extinction’, uncertainties in past and present diversity assessments, and data incommensurabilities undermine a straightforward answer to the question of whether we are in, or entering, a sixth mass extinction today. More broadly we argue that an excessive focus on the mass extinction framing can be misleading for present conservation efforts and may lead us to miss out on the many other valuable insights that Earth’s deep time can offer in guiding our future.

While the predominant focus of the philosophical literature on scientific modeling has been on single-scale models, most systems in nature exhibit complex multiscale behavior, requiring new modeling methods. This challenge of modeling phenomena across a vast range of spatial and temporal scales has been called the tyranny of scales problem. Drawing on research in the geosciences, I synthesize and analyze a number of strategies for taming this tyranny in the context of conceptual, physical, and mathematical modeling. This includes several strategies that can be deployed in physical modeling, even when strict dynamical scaling fails. In all cases, I argue that having an adequate conceptual model—given both the nature of the system and the particular purpose of the model—is essential. I draw a distinction between depiction and representation, and use this research in the geosciences to advance a number of debates in the philosophy of modeling.

We critically engage two traditional views of scientific data and outline a novel philosophical view that we call the pragmatic-representational view of data. On the PR view, data are representations that are the product of a process of inquiry, and they should be evaluated in terms of their adequacy or fitness for particular purposes. Some important implications of the PR view for data assessment, related to misrepresentation, context-sensitivity, and complementary use, are highlighted. The PR view provides insight into the common but little-discussed practices of iteratively reusing and repurposing data, which result in many datasets’ having a phylogeny—an origin and complex evolutionary history—that is relevant to their evaluation and future use. We relate these insights to the open-data and data-rescue movements, and highlight several future avenues of research that build on the PR view of data.

At the intersection of taxonomy and nomenclature lies the scientific practice of typification. This practice occurs in biology with the use of holotypes (type specimens), in geology with the use of stratotypes, and in metrology with the use of measurement prototypes. In this paper I develop the first general definition of a scientific type and outline a new philosophical theory of types inspired by Pierre Duhem. I use this general framework to resolve the necessity-contingency debate about type specimens in philosophy of biology, to advance the debate over the myth of the absolute accuracy of standards in metrology, and to address the definition-correlation debate in geology. I conclude that just as there has been a productive synergy between philosophical accounts of natural kinds and scientific taxonomic practices, so too there is much to be gained from developing a deeper understanding of the practices and philosophy of scientific types.

Model-data symbiosis is the view that there is an interdependent and mutually beneficial relationship between data and models, whereby models are not only data-laden, but data are also model-laden or model filtered. In this paper I elaborate and defend the second, more controversial, component of the symbiosis view. In particular, I construct a preliminary taxonomy of the different ways in which theoretical and simulation models are used in the production of data sets. These include data conversion, data correction, data interpolation, data scaling, data fusion, data assimilation, and synthetic data. Each is defined and briefly illustrated with an example from the geosciences. I argue that model-filtered data are typically more accurate and reliable than the so-called raw data, and hence beneficially serve the epistemic aims of science. By illuminating the methods by which raw data are turned into scientifically useful data sets, this taxonomy provides a foundation for developing a more adequate philosophy of data.

In 2012, the Geological Time Scale, which sets the temporal framework for studying the timing and tempo of all major geological, biological, and climatic events in Earth’s history, had one-quarter of its boundaries moved in a widespread revision of radiometric dates. The philosophy of metrology helps us understand this episode, and it, in turn, elucidates the notions of calibration, coherence, and consilience. I argue that coherence testing is a distinct activity preceding calibration and consilience, and I highlight the value of discordant evidence and trade-offs scientists face in calibration. The iterative nature of calibration, moreover, raises the problem of legacy data.

Traditionally Ψ is used to stand in for both the mathematical wavefunction (the representation) and the quantum state (the thing in the world). This elision has been elevated to a metaphysical thesis by advocates of the view known as wavefunction realism. My aim in this paper is to challenge the hegemony of the wavefunction by calling attention to a little-known formulation of quantum theory that does not make use of the wavefunction in representing the quantum state. This approach, called Lagrangian quantum hydrodynamics (LQH), is not an approximation scheme, but rather a full alternative formulation of quantum theory. I argue that a careful consideration of alternative formalisms is an essential part of any realist project that attempts to read the ontology of a theory off of the mathematical formalism. In particular, I show that LQH undercuts the central presumption of wavefunction realism and falsifies the claim that one must represent the many-body quantum state as living in a 3n-dimensional configuration space. I conclude by briefly sketching three different realist approaches one could take toward LQH, and argue that both models of the quantum state should be admitted. When exploring quantum realism, regaining sight of the proverbial forest of quantum representations beyond the Ψ is just the first step.

Despite widespread evidence that fictional models play an explanatory role in science, resistance remains to the idea that fictions can explain. A central source of this resistance is a particular view about what explanations are, namely, the ontic conception of explanation. According to the ontic conception, explanations just are the concrete entities in the world. I argue this conception is ultimately incoherent and that even a weaker version of the ontic conception fails. Fictional models can succeed in offering genuine explanations by correctly capturing relevant patterns of counterfactual dependence and licensing correct inferences. Using the example of Newtonian force explanations of the tides, I show how, even in science, fiction can be a vehicle for truth.

Despite an enormous philosophical literature on models in science, surprisingly little has been written about data models and how they are constructed. In this paper, I examine the case of how paleodiversity data models are constructed from the fossil data. In particular, I show how paleontologists are using various model-based techniques to correct the data. Drawing on this research, I argue for the following related theses: first, the ‘purity’ of a data model is not a measure of its epistemic reliability. Instead it is the fidelity of the data that matters. Second, the fidelity of a data model in capturing the signal of interest is a matter of degree. Third, the fidelity of a data model can be improved ‘vicariously’, such as through the use of post hoc model-based correction techniques. And, fourth, data models, like theoretical models, should be assessed as adequate for particular purposes.

The ontic conception of explanation, according to which explanations are "full-bodied things in the world," is fundamentally misguided. I argue instead for what I call the eikonic conception, according to which explanations are the product of an epistemic activity involving representations of the phenomena to be explained. What is explained in the first instance is a particular conceptualization of the explanandum phenomenon, contextualized within a given research program or explanatory project. I conclude that this eikonic conception has a number of benefits, including making better sense of scientific practice and allowing for the full range of normative constraints on explanation.

Detailed examinations of scientific practice have revealed that the use of idealized models in the sciences is pervasive. These models play a central role in not only the investigation and prediction of phenomena, but in their received scientific explanations as well. This has led philosophers of science to begin revising the traditional philosophical accounts of scientific explanation in order to make sense of this practice. These new model-based accounts of scientific explanation, however, raise a number of key questions: Can the fictions and falsehoods inherent in the modeling practice do real explanatory work? Do some highly abstract and mathematical models exhibit a noncausal form of scientific explanation? How can one distinguish an exploratory "how-possibly" model explanation from a genuine "how-actually" model explanation? Do modelers face tradeoffs such that a model that is optimized for yielding explanatory insight, for example, might fail to be the most predictively accurate, and vice versa? This chapter explores the various answers that have been given to these questions.

In the spirit of explanatory pluralism, this chapter argues that causal and noncausal explanations of a phenomenon are compatible, each being useful for bringing out different sorts of insights. After reviewing a model-based account of scientific explanation, which can accommodate causal and noncausal explanations alike, an important core conception of noncausal explanation is identified. This noncausal form of model-based explanation is illustrated using the example of how Earth scientists in a subfield known as aeolian geomorphology are explaining the formation of regularlyspaced sand ripples. The chapter concludes that even when it comes to everyday "medium-sized dry goods" such as sand ripples, where there is a complete causal story to be told, one can find examples of noncausal scientific explanations.

The geosciences include a wide spectrum of disciplines ranging from paleontology to climate science, and involve studies of a vast range of spatial and temporal scales, from the deep-time history of microbial life to the future of a system no less immense and complex than the entire Earth. Modeling is thus a central and indispensable tool across the geosciences. Here, we review both the history and current state of model-based inquiry in the geosciences. Research in these fields makes use of a wide variety of models, such as conceptual, physical, and numerical models, and more specifically cellular automata, artificial neural networks, agent-based models, coupled models, and hierarchical models. We note the increasing demands to incorporate biological and social systems into geoscience modeling, challenging the traditional boundaries of these fields. Understanding and articulating the many different sources of scientific uncertainty – and finding tools and methods to address them – has been at the forefront of most research in geoscience modeling. We discuss not only structuralmodel uncertainties, parameter uncertainties, and solution uncertainties, but also the diverse sources of uncertainty arising from the complex nature of geoscience systems themselves. Without an examination of the geosciences, our philosophies of science and our understanding of the nature of model-based science are incomplete.

There is a growing recognition that fictions have a number of legitimate functions in science, even when it comes to scientific explanation. However, the question then arises, what distinguishes an explanatory fiction from a nonexplanatory one? Here I examine two cases—one in which there is a consensus in the scientific community that the fiction is explanatory and another in which the fiction is not explanatory. I shall show how my account of “model explanations” is able to explain this asymmetry, and argue that realism—of a more subtle form—does have a role in distinguishing explanatory from non- explanatory fictions.

This article addresses the question whether supertasks are possible within the context of non-relativistic quantum mechanics. The supertask under consideration consists of performing an infinite number of quantum mechanical measurements in a finite amount of time. Recent arguments in the physics literature claim to show that continuous measurements, understood as N discrete measurements in the limit where N goes to infinity, are impossible. I show that there are certain kinds of measurements in quantum mechanics for which these arguments break down. This suggests that there is a new context in which quantum mechanics, in principle, permits the performance of a supertask.

Simulations using idealized numerical models can often generate behaviors or patterns that are visually very similar to the natural phenomenon being investigated and to be explained. The question arises, when should these model simulations be taken to provide an explanation for why the natural phenomena exhibit the patterns that they do? An important distinction for answering this question is that between ‘how-possibly’ explanations and ‘how-actually’ explanations. Despite the importance of this distinction there has been surprisingly little agreement over how exactly this distinction should bedrawn. I shall argue that inadequate attention has been paid to the different contexts in which an explanation can be given and the different levels of abstraction at which the explanandum phenomenon can be framed. By tracing how scientists are using model simulations to explain a striking periodic banding of vegetation known as tiger bush, I will show how our understanding of the distinction between how-possibly and how-actually model explanations needs to be revised.

The 2006 decision by the International Astronomical Union to strip Pluto of its status as a planet generated considerable uproar not only in scientific circles, but among the lay public as well. After all, how can a vote by 424 scientists in a conference room in Prague undermine what every well-educated second grader knows is a scientific fact? The Pluto controversy provides a new and fertile ground in which to revisit the traditional philosophical problems of natural kinds and scientific change. Before engaging these philosophical problems, however, there are two misguided reactions to the Pluto controversy worth dispelling from the start. The first misguided reaction is that this sort of classificatory ..

Although predictive power and explanatory insight are both desiderata of scientific models, these features are often in tension with each other and cannot be simultaneously maximized. In such situations, scientists may adopt what I term a ‘division of cognitive labor’ among models, using different models for the purposes of explanation and prediction, respectively, even for the exact same phenomenon being investigated. Adopting this strategy raises a number of issues, however, which have received inadequate philosophical attention. More specifically, while one implication may be that it is inappropriate to judge explanatory models by the same standards of quantitative accuracy as predictive models, there still needs to be some way of either confirming or rejecting these model explanations. Here I argue that robustness analyses have a central role to play in testing highly idealized explanatory models. I illustrate these points with two examples of explanatory models from the field of geomorphology.