Elliott Sober

Evidence and Evolution has four chapters: (1) Evidence, (2) Intelligent Design, (3) Natural Selection, and (4) Common Ancestry. The first chapter develops tools that are used in the rest of the book, though more ideas about evidence are added. In Chapter 1, I endorse a pluralistic outlook—Bayesianism is fine in some inference problems, likelihoodism in others, and AIC in still others. In Chapter Two, on intelligent design, I try to develop the strongest possible formulation of the design argument for the existence of God, after which I criticize the argument so conceived. This second chapter also attempts to resuscitate the concept of testability. Chapter 3, on natural selection, discusses how to evaluate competing hypotheses on evolution mechanisms and evaluate the use of the principle of common cause, molecular data, and cladistic parsimony. Chapter 4 is on common ancestry: what it means to say that all life on earth has a common ancestor, and s. Why should the similarity of two species be evidence that they have a common ancestor? The chapter concludes with a discussion of how biologists use cladistic parsimony to infer phylogenetic trees and compare it with explicit statistical approaches.

My critical remarks' on Alexander Rosenberg’s article on fitness have elicited a rejoinder from Mary Williams and Rosenberg himself. They charge that my criticisms are a “tissue of misunderstandings” (738); since they misunderstand my own position in fundamental ways, it may help to try to clarify the points that divide us. In the interest of brevity, I will ignore technical issues concerning the internal correctness of Williams’s axiomatization and will focus on questions of broader philosophical interest.

Alexander Rosenberg began his recent article on the concept of fitness with the remark that “debates about the cognitive status of the Darwinian theory of natural selection should have ended long ago.” I agree that this obsession need to be overcome. But Rosenberg repeats some of the old mistakes and invents epicycles on others. In this comment I will not be able to circumscribe fully the range of the topics that an adequate treatment of this cluster of problems demands. A few critical comments will indicate what I find wanting in Rosenberg’s treatment.

Egoism and altruism need not be characterized as single factor theories of motivation, according to which there is a single kind of preference that moves people to action. Rather, each asserts a claim of causal primacy—a claim as to which sort of preference is the more powerful influence on behavior. This paper shows that this idea of causal primacy can be clarified in a standard scientific way. This formulation explains why many observed behaviors fail to discriminate between the hypothesis that the agent is altruistic and the hypothesis that the agent is egoistic. A distinction between altruistic motivation and altruistic action is then drawn, from which it follows that it is an open question how often altruists behave altruistically

I want to explore what happens to two philosophical issues when we assume that the mind, a functional device, is to be understood by the same sort of functional analysis that guides biological investigation of other organismic systems and characteristics. The first problem area concerns the concept of rationality, its connection with reliability and reproductive success, and the status of rationality hypotheses in attribution of beliefs. It has been argued that ascribing beliefs to someone requires the assumption that that person is rational. It also has been argued that evolutionary theory can account for the capacity we have for rational thought by appealing to the idea that rational methods for constructing beliefs are reliable and therefore represented a selected advantage. Both of these claims about rationality are critically examined. In the second part of the paper, I turn to some criticisms that have been advanced against "functionalist" solutions to the mind/body problem. These criticisms are defused when that doctrine is understood in terms of a Teleological (rather than a Turing Machine) notion of function. However, functionalism does not emerge totally unscathed. Voltaire's Dr. Pangloss saw everything in terms of its function and its perfect performance of its function. In the philosophy of mind, his influence lives on in the form of two ideas: (i) that we must possess rational methods for constructing beliefs, since our minds are the product of natural selection, and (ii) that psychological states and properties are individuated by their psychological functions. Contemporary biology provides the resources for avoiding Pangloss's wideeyed teleology in the study of adaptation. It is to be hoped that progress in psychology will loosen the grip of Panglossian assumptions in the study of mind.

These essays by leading scientists and philosophers address conceptual issues that arise in the theory and practice of evolutionary biology. The third edition of this widely used anthology has been substantially revised and updated. Four new sections have been added: on women in the evolutionary process, evolutionary psychology, laws in evolutionary theory, and race as social construction or biological reality. Other sections treat fitness, units of selection, adaptationism, reductionism, essentialism, species, phylogenetic inference, cultural evolution, and evolutionary ethics. Each of the twelve sections contains two or three essays that develop different views of the subject at hand. For example, the section on evolutionary psychology offers one essay by two founders of the field and another that questions its main tenets. One sign that a discipline is growing is that there are open questions, with multiple answers still in competition; the essays in this volume demonstrate that evolutionary biology and the philosophy of evolutionary biology are living, growing disciplines.

Evolutionary theory is awash with probabilities. For example, natural selection is said to occur when there is variation in fitness, and fitness is standardly decomposed into two components, viability and fertility, each of which is understood probabilistically. With respect to viability, a fertilized egg is said to have a certain chance of surviving to reproductive age; with respect to fertility, an adult is said to have an expected number of offspring.1 There is more to evolutionary theory than the theory of natural selection, and here too one finds probabilistic concepts aplenty. When there is no selection, the theory of neutral evolution says that a gene’s chance of eventually reaching fixation is 1/(2N), where N is the number of organisms in the generation of the diploid population to which the gene belongs. The evolutionary consequences of mutation are likewise conceptualized in terms of the probability per unit time a gene has of changing from one state to another. The examples just mentioned are all “forwarddirected” probabilities; they describe the probability of later events, conditional on earlier events. However, evolutionary theory also uses “backwards probabilities” that describe the probability of a cause conditional on its effects; for example, coalescence theory allows one to calculate the expected number of generations in the past that the genes in the present generation find their most recent common ancestor.

The reception so far of Kitcher's Vaulting Ambition reminds me of the old saw about the difference between an optimist and a pessimist. Looking at the same glass of water, the former sees it as half full while the latter sees it as half empty. Some have seen Kitcher's book as a vindication of the possibility of an evolutionary science of human behavior; others have seen it as a devastating critique of the most influential efforts to date to construct such a science. As in the joke about the water glass, both assessments have their point. Sociobiology is a research program, not a unified theory. What one can do is test particular hypotheses within this program and see whether they live up to reasonable standards of rigor and evidence. This is what Kitcher does, with great energy and care.

Suppose that several observations “coincide,” meaning that they are similar in some interesting respect. Is this coinciding a mere coincidence, or does it derive from a common cause? Those who reason about this kind of question—whether they embrace the first answer or the second—often deploy a mode of inference that I call probabilistic modus tollens. In this chapter I criticize probabilistic modus tollens and consider likelihood and Bayesian frameworks for reasoning about coincidences. I also consider the perspective offered by model selection theory (including the Akaike information criterion), and argue that model selection often provides important insights.

Markov models of evolution describe changes in the probability distribution of the trait values a population might exhibit. In consequence, they also describe how entropy and conditional entropy values evolve, and how the mutual information that characterizes the relation between an earlier and a later moment in a lineage’s history depends on how much time separates them. These models therefore provide an interesting perspective on questions that usually are considered in the foundations of physics—when and why does entropy increase and at what rates do changes in entropy take place? They also throw light on an important epistemological question: are there limits on what your observations of the present can tell you about the evolutionary past?

Reductionism is often understood to include two theses: (1) every singular occurrence that the special sciences can explain also can be explained by physics; (2) every law in a higher-level science can be explained by physics. These claims are widely supposed to have been refuted by the multiple realizability argument, formulated by Putnam (1967, 1975) and Fodor (1968, 1975). The present paper criticizes the argument and identifies a reductionistic thesis that follows from one of the argument's premises

In this brief space I want to describe how Chomsky's analysis of "psychological reality" departs from what I think is a fairly standard construal of the idea. This familiar formulation arises from distinguishing between someone's following a rule and someone's acting in conformity with a rule. The former idea, but not the latter, involves the idea that the person has some mental representation of the rule that plays a certain causal role in determining behavior. Although there may be many grammatical rules to which a person's verbal behavior (ignoring slips of the tongue and other performance interferences) conforms, only some of those rules have psychological reality; these are the ones that are internalized in thought and play some appropriate causal role.

How should the concept of evidence be understood? And how does the concept of evidence apply to the controversy about creationism as well as to work in evolutionary biology about natural selection and common ancestry? In this rich and wide-ranging book, Elliott Sober investigates general questions about probability and evidence and shows how the answers he develops to those questions apply to the specifics of evolutionary biology. Drawing on a set of fascinating examples, he analyzes whether claims about intelligent design are untestable; whether they are discredited by the fact that many adaptations are imperfect; how evidence bears on whether present species trace back to common ancestors; how hypotheses about natural selection can be tested, and many other issues. His book will interest all readers who want to understand philosophical questions about evidence and evolution, as they arise both in Darwin's work and in contemporary biological research.

Instrumentalism is usually understood as a semantic thesis: scientific theories are neither true nor false, but are merely instruments for making predictions. Scientific realists are on firm ground when they reject this semantic claim. This paper focuses on epistemological rather than semantic instrumentalism. This form of instrumentalism claims that theories are to be judged by their ability to make accurate predictions, and that predictive accuracy is the only consideration that matters in the end. I consider how instrumentalism is related to a quite different proposal concerning how theories should be evaluated—scientific realism. Instrumentalism allows for the fact that a false model can get one closer to the truth than a true one.

It is a challenge to explain how evolutionary altruism can evolve by the process of natural selection, since altruists in a group will be less fit than the selfish individuals in the same group who receive benefits but do not make donations of their own. Darwin proposed a theory of group selection to solve this puzzle. Very simply, even though altruists are less fit than selfish individuals within any single group, groups of altruists are more fit than groups of selfish individuals. If a population is subdivided into many groups that vary in their altruistic tendencies, altruism will be favored at the level of selection among groups even as it is being disfavored at the level of selection among individuals within groups. Darwin’s scenario became the basis for a theoretical framework called multilevel selection theory.

[Elliott Sober] In 'Two Dogmas of Empiricism', Quine attacks the analytic/synthetic distinction and defends a doctrine that I call epistemological holism. Now, almost fifty years after the article's appearance, what are we to make of these ideas? I suggest that the philosophical naturalism that Quine did so much to promote should lead us to reject Quine's brief against the analytic/synthetic distinction; I also argue that Quine misunderstood Carnap's views on analyticity. As for epistemological holism, I claim that this thesis does not follow from the logical point that Duhem and Quine made about the role of auxiliary assumptions in hypothesis testing, and that the thesis should be rejected. \\\ [Peter Hylton] Section I of this essay discusses Quine's views about reference, contrasting them with those of Russell. For the latter, our language and thought succeed in being about the world because of our acquaintance with objects; the relation of reference-roughly, the relation between a name and its bearer-is thus fundamental. For Quine, by contrast, the fundamental relation by which our language comes to be about the world, and to have empirical content, is that between a sentence and stimulations of our sensory surfaces; reference, while important, is a derivative notion. Section II shows how this view of reference as derivative makes possible the notorious Quinean doctrine of ontological relativity. Section III raises the issue of realism. It argues that somewhat different notions of realism are in play for Quine and for Russell-for Russell, objects, and our knowledge of objects, play the fundamental role, while for quine objectivity and truth are fundamental, with ontology being derivative.

One possible interpretation of the species concept is that specifies are natural kinds. Another species concept is that species are individuals whose parts are organisms. Philip Kitcher takes seriously both these ideas; he sees a role for the genealogical/historical conception and also for the one that is “purely qualitative”. I criticize his ideas here. I see the genealogical conception at work in biological discussion of species and it is presupposed by an active and inventive research program, but the natural kind concept is not. I also criticize Kitcher’s criticisms against Hull’s position that species are individuals, including Kitcher’s idea that species are sets of organisms, his explanations of why “all swans are white” isn’t law-like, his discussion of the example of multiple origination. Finally, I argue that given the current evolutionary developments, pluralism is the "null hypothesis" that we should attempt to refute.

Solipsism poses a familiar epistemological problem. Each of us has beliefs about a world that allegedly exists outside our own minds. The problem is to justify these nonsolipsistic convictions. One standard approach is to argue that the existence of things outside our own sensations may reasonably be inferred from regularities that obtain within our sensations. Certain experiences, which I will call tiger sounds and tiger visual images, exhibit a striking correlation. We can explain the existence of this correlation by postulating an entity that is a cause of both. If there were tigers, it would be no surprise that certain sights and certain sounds tend to co-occur. Our rejection of solipsism can thus be justified by appeal to an abductive argument; we advance an inference to the best explanation conforming to the pattern that Reichenbach called the principle of the common cause.

The debate over the relative importance of natural selection as compared to other forces affecting the evolution of organisms is a long-standing and central controversy in evolutionary biology. The theory of adaptationism argues that natural selection contains sufficient explanatory power in itself to account for all evolution. However, there are differing views about the efficiency of the adaptation model of explanation. If the adaptationism theory is applied, are energy and resources being used to their optimum? This book presents an up-to-date view of this controversy and reflects the dramatic changes in our understanding of evolution that have occurred in the last twenty years. The volume combines contributions from biologists and philosophers, and offers a systematic treatment of foundational, conceptual, and methodological issues surrounding the theory of adaptationism. The essays examine recent developments in topics such as phylogenetic analysis, the theory of optimality and ess models, and methods of testing models.