•  891
    Classificatory Theory in Data-intensive Science: The Case of Open Biomedical Ontologies
    International Studies in the Philosophy of Science 26 (1). 2012.
    Knowledge-making practices in biology are being strongly affected by the availability of data on an unprecedented scale, the insistence on systemic approaches and growing reliance on bioinformatics and digital infrastructures. What role does theory play within data-intensive science, and what does that tell us about scientific theories in general? To answer these questions, I focus on Open Biomedical Ontologies, digital classification tools that have become crucial to sharing results across rese…Read more
  •  19
    The scientific importance of asking questions at meetings: Why virtual debate is not enough
    with Maureen A. O'Malley
    Bioessays 33 (1): 35-37. 2011.
  •  45
    Growing Weed, Producing Knowledge An Epistemic History of Arabidopsis thaliana
    History and Philosophy of the Life Sciences 29 (2). 2007.
    Arabidopsis is currently the most popular and well-researched model organism in plant biology. This paper documents this plant's rise to scientific fame by focusing on two interrelated aspects of Arabidopsis research. One is the extent to which the material features of the plant have constrained research directions and enabled scientific achievements. The other is the crucial role played by the international community of Arabidopsis researchers in making it possible to grow, distribute and use p…Read more
  •  50
    Infrared metaphysics: the elusive ontology of radiation. Part 1
    Studies in History and Philosophy of Science Part A 36 (3): 477-508. 2005.
    Hardly any ontological result of modern science is more firmly established than the fact that infrared radiation differs from light only in wavelength; this is part of the modern conception of the continuous spectrum of electromagnetic radiation reaching from radio waves to gamma radiation. Yet, like many such evident truths, the light-infrared unity was an extremely difficult thing to establish. We examine the competing arguments in favour of the unified and pluralistic theories of radiation, a…Read more
  •  34
    Understanding in biology: the impure nature of biological knowledge
    In Henk De Regt, Sabina Leonelli & Kai Eigner (eds.), Scientific Understanding: Philosophical Perspectives, University of Pittsburgh Press. pp. 189--209. 2009.