•  42
    This book provides a unified account of models and model-building practice in AI-based science, particularly machine learning (ML). It analyzes the relationship between ML model-building practices and scientific domain knowledge, develops an account of ML models as technical artifacts structured around five levels of abstraction that captures their representational capabilities, and shows how this framework can be used to reformulate contemporary debates in philosophy of science and AI in more f…Read more
  •  19
    Philosophers have claimed that: (a) Born–Oppenheimer approximation methods for solving molecular Schrödinger equations violate the Heisenberg uncertainty relations; therefore, (b) ‘quantum chemistry’ is not fully quantum; and (c) therefore chemistry does not reduce to physics. This paper analyses the reasoning behind Born–Oppenheimer methods and shows that they are internally consistent and fully quantum mechanical, contrary to (a)–(c). Our analysis addresses important issues of mathematical rig…Read more
  •  386
    Psillos has recently argued that van Fraassen’s arguments against abduction fail. Moreover, he claimed that, if successful, these arguments would equally undermine van Fraassen’s own constructive empiricism, for, Psillos thinks, it is only by appeal to abduction that constructive empiricism can be saved from issuing in a bald scepticism. We show that Psillos’ criticisms are misguided, and that they are mostly based on misinterpretations of van Fraassen’s arguments. Furthermore, we argue that Psi…Read more
  •  2
    Structural Realism
    Stanford Encyclopedia of Philosophy. 2007.
  • Category theory and ontology
    Synthese 194. 2017.
  •  129
    This paper investigates the formation and propagation of wavefunction `branches' through the process of entanglement with the environment. While this process is a consequence of unitary dynamics, and hence significant to many if not all approaches to quantum theory, it plays a central role in many recent articulations of the Everett or `many worlds' interpretation. A highly idealized model of a locally interacting system and environment is described, and investigated in several situations in whi…Read more
  •  686
    As large language models (LLMs) such as ChatGPT, Claude, Gemini, and Perplexity become increasingly ubiquitous as both tools and objects of scientific study, in addition to their established roles as chatbots, text generators and translators, questions about their identity conditions become scientifically as well as philosophically and socially important. This paper is about how to count language models. We argue that much of the emerging literature on these systems presupposes an answer to the …Read more
  •  39
    Physical explanations in evolutionary biology
    History and Philosophy of the Life Sciences 47 (4): 54. 2025.
    The consensus in philosophy of biology seems to be that although nothing in biological systems is strictly incompatible with physical laws, biology is to a very great extent autonomous from physics. The main thesis of this paper is that, although biology is autonomous from the physical sciences in several ways, it is not explanatorily independent from physics. Physical explanations are pervasive and important in biology, including in evolutionary biology. The paper presents three case studies of…Read more
  •  7
    Few can imagine a world without telephones or televisions; many depend on computers and the Internet as part of daily life. Without scientific theory, these developments would not have been possible. In this exceptionally clear and engaging introduction to philosophy of science, James Ladyman explores the philosophical questions that arise when we reflect on the nature of the scientific method and the knowledge it produces. He discusses whether fundamental philosophical questions about knowledge…Read more
  •  94
    Scientific empiricism and modal structure
    Synthese 206 (5): 1-15. 2025.
    Empiricism is associated with the epistemic privileging of sensory experience. Modern science is based on experiment and observation, but it is highly revisionary of the manifest image, and does not epistemically privilege the human senses. Yet many scientists characterise themselves as empiricists, and many empiricists in philosophy take science to be the ultimate form of rational enquiry. This apparent paradox is resolved by formulating empiricism scientifically so that it epistemically privil…Read more
  •  190
    Physical Explanation and the Autonomy of Biology
    Philosophy of Science 92 (5): 1128-1139. 2025.
    It is often claimed that biology is autonomous from the physical sciences, but this is seldom made precise. This article makes explicit, for the first time, five distinct “autonomy of biology” theses. Three moderate theses concerning scientific status, methodological distinctness, and nonreducibility of biology to physics are correct and are nearly universally accepted. Two stronger theses, concerning the exclusivity of biological explanation and irrelevance of physical laws, are shown to be fal…Read more
  •  3
    Reviews (review)
    with Ian D. Lawrie, Mark Cortiula, Desmond Barrett, Sokhieng Au, Ivan Crozier, Stephanie H. Kenen, Geoffrey Cocks, Martin Bridgstock, William N. Kaghan, Nicolas Rasmussen, Michael Ruse, Dennis Dean, David Oldroyd, Jonathan Coopersmith, Birgit Lohmann, Cornelia Lüdecke, William A. Turner, Laura Ruetsche, Dale Jacquette, Hiram Caton, Lisa Featherstone, Andy Pickering, Deborah Dysart, Barbara Nunn, John Wennerbom, Katherine Neal, and Hugh Clapin
    Metascience 10 (1): 50-149. 2001.
  • Few can imagine a world without telephones or televisions; many depend on computers and the Internet as part of daily life. Without scientific theory, these developments would not have been possible. In this exceptionally clear and engaging introduction to philosophy of science, James Ladyman explores the philosophical questions that arise when we reflect on the nature of the scientific method and the knowledge it produces. He discusses whether fundamental philosophical questions about knowledge…Read more
  •  2544
    Effective Ontic Structural Realism
    British Journal for the Philosophy of Science. forthcoming.
    Three accounts of effective realism (ER) have been advanced to solve three problems for scientific realism: Fraser and Vickers (forthcoming) develop a version of ER about non-relativistic quantum mechanics that they argue is compatible with all the main realist versions (‘interpretations’) of quantum mechanics avoiding the problem of underdetermination among them; Williams (2019) and Fraser (2020b) propose ER about quantum field theory as a response to the problems facing realist interpretations…Read more
  •  859
    Identity and discernibility in philosophy and logic
    Review of Symbolic Logic 5 (1): 162-186. 2012.
    Questions about the relation between identity and discernibility are important both in philosophy and in model theory. We show how a philosophical question about identity and dis- cernibility can be ‘factorized’ into a philosophical question about the adequacy of a formal language to the description of the world, and a mathematical question about discernibility in this language. We provide formal definitions of various notions of discernibility and offer a complete classification of their logica…Read more
  •  58
    This paper designs and defends a conceptual framework for the disambiguation of scientific language regarding open and closed systems. We argue that the open-closed distinction should always be precisifed by specifying a characteristic quantity that is conserved if and only if the system is closed. Open systems are those for which conservation of the characteristic quantity fails. This precisification is in accord with much but not all existing practice. We show that an open system can have well…Read more
  •  140
    This paper addresses the question ‘what is an organism?’. Extant theories of organismality only provide a partial answer because they do not include an account of composition on which an ontology of living entities can be based. Here we develop a new account of what organisms are, based on a naturalistic answer to the special composition question, the bound state view. We argue that physical structure, including the existence of a boundary, is essential for life, and that, therefore, organisms a…Read more
  •  67
    A Comparison of Identity in Physics and Mathematics
    In Bartosz Brożek, Janusz Mączka & Wojciech P. Grygiel (eds.), Philosophy in science: methods and applications, Copernicus Center Press. 2011.
  •  60
    Gordon Finlayson's website
    with Martha Nussbaum and Richard Smith
    Philosophy. forthcoming.
  •  825
    The principle of the identity of indiscernibles and quantum mechanics
    Philosophy of Science 77 (1): 117-136. 2010.
    It is argued that recent discussion of the principle of the identity of indiscernibles (PII) and quantum mechanics has lost sight of the broader philosophical motivation and significance of PII and that the `received view' of the status of PII in the light of quantum mechanics survives recent criticisms of it by Muller, Saunders, and Seevinck.
  •  10
  •  6
  •  3
    Conclusion : philosophy enough
    with Don Ross
    In James Ladyman & Don Ross (eds.), Every thing must go: metaphysics naturalized, Oxford University Press. pp. 298-310. 2007.
    This conclusion criticizes Daniel Dennett for dividing reality into first-class illata and second-class abstracta, and argues that fundamental physics directly studies extra-representational real patterns, while special sciences study real patterns located by means of the notional-world concepts of cohesion and causation. Dennett's abstracta are approximate descriptions of the illata, where the approximations in question usefully serve human purposes. By contrast, special-science real patterns a…Read more
  •  8
    Causation in a structural world
    In James Ladyman & Don Ross (eds.), Every thing must go: metaphysics naturalized, Oxford University Press. pp. 258-297. 2007.
    This chapter argues that the idea of causation has similar status to ideas of cohesion, forces, and things. Appreciating the role of causation in a notional world is crucial to understanding the nature of the special sciences, and the general ways in which they differ from fundamental physics. Causation, unlike cohesion, is both a notional-world concept and a folk concept. Moreover, causation, unlike cohesion, is a basic category of traditional metaphysics, including metaphysics that purports to…Read more
  •  22
    Scientific realism, constructive empiricism, and structuralism
    with Don Ross
    In James Ladyman & Don Ross (eds.), Every thing must go: metaphysics naturalized, Oxford University Press. pp. 66-129. 2007.
    This chapter argues that a form of structural realism is motivated by reflection on issues that arise in two different domains that have been the subject of intense scrutiny during recent decades. These domains are related to: firstly, problems from the history of science about the abandonment of ontological commitments as old theories which are replaced by more empirically adequate ones; and secondly, questions arising from the debate between scientific realists and constructive empiricists abo…Read more